BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037D01SP1|AL430374
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1650 0.0
>3x_Contig1604
Length = 15703
Score = 1650 bits (828), Expect = 0.0
Identities = 888/908 (97%), Gaps = 3/908 (0%)
Strand = Plus / Plus
Query: 1 gatctggaaactgatattgctaaaatggacgaatgttatccaactgtggaaaagttagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4459 gatctggaaactgatattgctaaaatggacgaatgttatccaactgtggaaaagttagaa 4518
Query: 61 tctgctaacgccaaggagagagatgatcatcatctgcaagtactgtccacctccctcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4519 tctgctaacgccaaggagagagatgatcatcatctgcaagtactgtccacctccctcaag 4578
Query: 121 caatcgagctccagaagtatatcggatctttcaaacaaatcacaagtatcattggattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4579 caatcgagctccagaagtatatcggatctttcaaacaaatcacaagtatcattggattca 4638
Query: 181 aatgaaaggcacagttcacatggtataagggcgccctctccacttccttcgtcacaacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4639 aatgaaaggcacagttcacatggtataagggcgccctctccacttccttcgtcacaacag 4698
Query: 241 ccacagaatactgcgaatatgtcggctgctagacagcataaacaacataatccttttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4699 ccacagaatactgcgaatatgtcggctgctagacagcataaacaacataatccttttcaa 4758
Query: 301 tcacaattccagcctgaagtggatgcatctgagtwctttgatgcgaacaacgaacaatac 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4759 tcacaattccagcctgaagtggatgcatctgagtactttgatgcgaacaacgaacaatac 4818
Query: 361 ttcaaaggcactcctcctgcacatccaaaaaatgaaaagaatgtatcatattttcaacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4819 ttcaaaggcactcctcctgcacatccaaaaaatgaaaagaatgtatcatattttcaacaa 4878
Query: 421 tctccgatgaaggaaaacaacctaaataacttgagtatccaacaaagtgatcaagcccgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4879 tctccgatgaaggaaaacaacctaaataacttgagtatccaacaaagtgatcaagcccgt 4938
Query: 481 acttttgatactacaatgcctatttctgatgttccaaataatggcaacgtcgtgaatgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4939 acttttgatactacaatgcctatttctgatgttccaaataatggcaacgtcgtgaatgac 4998
Query: 541 gaatacctgattgacatttccccacccagaaataacgtaccctattctacaccagccgca 600
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||
Sbjct: 4999 gaatacctgattgacatttccccacccataaataacttaccctattctacaccatcctca 5058
Query: 601 attacagccaatatgcaagatcaaatcatttcatcgcaacctttat-ctcaatctcaatc 659
|||||| ||||||| ||| ||||||||||||||| |||||||||| |||||||||||||
Sbjct: 5059 attacatccaatattcaatttcaaatcatttcatctcaacctttatgctcaatctcaatc 5118
Query: 660 tcaatctaaacctcagcctcttcctccdbcccadccccaaccccaaccccaaccccaagc 719
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 5119 tcaatctaaacctcagcctcttcctccaccccaaccccaaccccaaccccaaccccaagc 5178
Query: 720 tcaagctcaaccgaatacacgagcttcactgaggcctgagcgcca-sagcraaattcctg 778
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 5179 tcaagctcaaccgaatacacgagcttcactgaggcctgagcgccagcagc-aaattcctg 5237
Query: 779 ctcaaccacgattagaccttacttttgatcaacttgatctttcaaagaattcattgacta 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5238 ctcaaccacgattagaccttacttttgatcaacttgatctttcaaagaattcattgacta 5297
Query: 839 ggcagtcagatacagacctagaagagagcattatatcagatgaragcatttcactcgatt 898
|||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 5298 ggcagtcagatacagaactagaagaaagcattatatcagatgaaagcatttcactcgatt 5357
Query: 899 tgaagcag 906
||||||||
Sbjct: 5358 tgaagcag 5365
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6580
Number of Sequences: 1807
Number of extensions: 6580
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)